 |
PDBsum entry 1f1c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1f1c calculated with MOLE 2.0
|
PDB id
|
|
|
|
1f1c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
0 tunnels,
coloured by tunnel radius |
 |
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.39 |
1.39 |
25.2 |
0.13 |
0.27 |
10.5 |
71 |
 |
3 |
0 |
1 |
4 |
2 |
2 |
2 |
 |
HEC 200 A
|
 |
 |
2 |
 |
1.29 |
1.29 |
25.2 |
0.11 |
0.29 |
12.6 |
71 |
3 |
0 |
1 |
4 |
2 |
2 |
2 |
HEC 400 B
|
 |
3 |
 |
1.41 |
1.41 |
26.5 |
1.02 |
0.54 |
6.8 |
84 |
1 |
1 |
1 |
7 |
1 |
0 |
0 |
HEC 200 A
|
 |
4 |
 |
1.29 |
1.29 |
26.7 |
1.03 |
0.50 |
6.4 |
84 |
1 |
1 |
1 |
7 |
1 |
0 |
0 |
HEC 400 B
|
 |
5 |
 |
1.28 |
1.28 |
29.3 |
0.33 |
0.40 |
10.2 |
72 |
2 |
0 |
2 |
6 |
3 |
1 |
2 |
HEC 400 B
|
 |
6 |
 |
1.27 |
1.27 |
48.3 |
0.64 |
0.47 |
12.9 |
76 |
4 |
1 |
3 |
9 |
4 |
2 |
3 |
HEC 200 A HEC 400 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |