spacer
spacer

PDBsum entry 1f13

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 1f13 calculated with MOLE 2.0 PDB id
1f13
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.32 5.8 -0.24 -0.27 7.1 68 1 0 0 1 2 1 0  
2 1.36 2.2 -0.60 0.03 25.6 84 1 1 0 1 0 0 0  
3 1.43 7.2 -2.07 -0.51 24.9 87 2 1 1 1 0 0 0  
4 1.29 2.5 -0.73 -0.40 16.7 66 1 1 0 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer