spacer
spacer

PDBsum entry 1ezs

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1ezs calculated with MOLE 2.0 PDB id
1ezs
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.45 15.3 -1.25 -0.63 14.7 90 3 1 2 1 0 0 0  
2 1.40 1.40 15.7 -0.55 -0.44 13.7 80 0 3 2 2 0 0 2  
3 1.50 1.65 18.1 -0.44 -0.44 12.9 81 1 3 2 2 0 0 2  
4 1.44 1.47 18.3 -1.41 -0.60 10.4 85 2 1 3 1 1 0 0  
5 1.44 1.47 26.0 -1.02 -0.54 16.5 80 3 2 2 1 0 0 2  
6 1.39 1.40 26.7 -0.54 -0.40 13.2 80 1 2 3 3 1 0 1  
7 1.73 1.88 17.3 -0.58 -0.35 16.0 80 1 3 2 1 0 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer