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PDBsum entry 1evs

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Cytokine PDB id
1evs
Contents
Protein chain
163 a.a. *
Waters ×116
* Residue conservation analysis

References listed in PDB file
Key reference
Title Crystal structure and functional dissection of the cytostatic cytokine oncostatin m.
Authors M.C.Deller, K.R.Hudson, S.Ikemizu, J.Bravo, E.Y.Jones, J.K.Heath.
Ref. Structure, 2000, 8, 863-874. [DOI no: 10.1016/S0969-2126(00)00176-3]
PubMed id 10997905
Abstract
BACKGROUND: The cytokine oncostatin M (OSM) inhibits growth of certain tumour-derived cells, induces proliferation in other cell types (e.g. haemangioblasts) and is a mediator of inflammatory responses. Its mechanism of action is via specific binding to gp130 and either the leukaemia inhibitory factor receptor (LIFR) or oncostatin M receptor (OSMR) systems at the cell surface to form an active signalling complex. RESULTS: We report here the crystal structure of human oncostatin M (hOSM) along with mutagenesis data which map the receptor-binding epitopes of the molecule. The structure was determined to a resolution of 2.2 A and conforms to the haematopoietin cytokine up-up-down-down four-helix bundle topology. The site 2 epitope, responsible for gp130 binding, is centred around Gly120 which forms a 'dimple' on the surface of the molecule located on helices A and C. The site 3 motif, responsible for LIFR and OSMR binding, consists of a protruding Phe160/Lys163 pair located at the start of helix D. CONCLUSIONS: The data presented allow functional dissection of the receptor-binding interfaces to atomic resolution. Modelling suggests that the gp130 residue Phe169 packs into the site 2 dimple in an analogous fashion to structurally equivalent residues at the growth hormone-growth hormone receptor interface, implying that certain key features may underlie recognition across the whole cytokine/receptor superfamily. Conversely, detailed comparison of the available structures suggests that variations on a common theme dictate the specificity of receptor-ligand interactions within the gp130 family of cytokines.
Figure 5.
Figure 5. Complimentarity between the interaction surfaces of hOSM and gp130. The solvent-accessible surfaces of site 2 on hOSM (left) and the cognate binding site on gp130 (right) are displayed with areas contributed by residues implicated in binding highlighted as coloured patches. The orientation for hOSM site 2 is rotated 90° from that in Figure 4 whereas gp130 is rotated by 180° from its orientation relative to hOSM in the putative interaction complex, as in the opening of a book.
The above figure is reprinted by permission from Cell Press: Structure (2000, 8, 863-874) copyright 2000.
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