PDBsum entry 1eqh

Pore analysis for: 1eqh calculated with

MOLE 2.0

PDB id

1eqh

Pores calculated on whole structure

Pores calculated excluding ligands

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13 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.30

1.89

27.1

-0.52

-0.36

10.9

82

1

1

7

5

2

0

0

NAG 671 A NAG 1671 B

2

1.55

1.65

28.2

-2.28

-0.75

4.9

77

2

0

6

0

2

2

0

3

1.24

1.25

30.0

-1.38

-0.49

13.9

74

2

4

3

2

3

1

1

4

1.25

1.25

42.3

-0.74

-0.21

9.9

76

3

3

5

4

4

2

0

5

1.95

2.02

44.3

-1.58

-0.37

13.6

75

5

3

5

2

2

3

1

6

1.25

1.25

44.8

-0.84

-0.34

8.7

73

3

4

6

3

4

2

2

7

1.24

1.25

46.0

-0.79

-0.18

9.1

74

4

2

5

4

4

2

0

8

1.17

1.18

46.4

-0.32

0.16

16.6

80

7

0

3

9

3

1

0

FLP 701 A BOG 802 A

9

1.25

1.25

47.3

1.10

0.22

2.9

79

1

0

5

11

6

1

0

FLP 701 A NAG 1671 B

10

1.17

1.17

47.6

2.04

0.89

3.3

72

2

0

2

13

5

0

0

FLP 701 A BOG 802 A

11

1.17

1.17

47.7

0.47

0.38

12.1

83

4

0

4

9

2

1

0

FLP 701 A BOG 802 A

12

1.20

1.78

59.8

0.55

0.57

12.0

70

4

0

2

10

4

1

0

BOG 802 A

13

1.28

1.28

79.4

0.97

0.32

6.3

80

4

0

7

16

7

1

0

NAG 1671 B FLP 1701 B BOG 1802 B

14

1.26

1.27

119.0

-0.44

-0.13

10.8

75

9

6

10

16

10

3

2

FLP 1701 B BOG 1802 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.