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PDBsum entry 1emh

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Top Page protein dna_rna tunnels links
Tunnel analysis for: 1emh calculated with MOLE 2.0 PDB id
1emh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.80 25.6 -1.11 -0.24 9.4 80 2 1 3 2 2 1 0  DG 3 B DT 4 B P2U 5 B DA 6 B DA 30 C
2 1.65 1.76 28.7 -1.06 -0.23 8.8 75 2 1 3 2 3 1 0  DG 3 B DT 4 B P2U 5 B DA 6 B DA 30 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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