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PDBsum entry 1ej6

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 1ej6 calculated with MOLE 2.0 PDB id
1ej6
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.64 38.6 -1.11 -0.64 8.2 92 0 2 7 6 0 1 1  
2 1.17 1.84 47.0 -0.93 -0.10 23.8 81 4 3 3 5 3 0 0  
3 2.13 2.22 59.3 -1.81 -0.50 18.3 85 7 1 6 1 2 0 0  
4 1.28 1.64 75.2 -1.35 -0.31 12.7 78 2 3 7 7 2 4 1  
5 1.24 1.25 76.1 -1.06 -0.31 13.9 83 4 3 9 6 2 2 0  
6 1.79 1.90 105.5 -1.82 -0.45 19.0 86 7 5 10 5 2 4 0  
7 1.77 1.92 124.1 -2.11 -0.44 28.4 85 13 4 6 7 1 1 0  
8 1.18 1.18 129.4 -0.25 -0.31 10.8 86 8 7 10 14 2 1 0  
9 1.21 1.98 195.2 -0.49 -0.33 12.0 87 9 11 14 23 2 5 0  
10 1.24 1.26 254.7 -1.74 -0.44 19.4 80 15 17 16 13 6 12 1  
11 1.35 2.04 301.4 -0.67 -0.30 12.0 83 12 16 24 28 12 6 0  
12 1.11 1.55 331.4 -1.87 -0.48 19.3 81 20 19 24 14 8 13 1  
13 1.24 1.41 458.2 -1.48 -0.39 17.8 85 25 22 32 27 12 16 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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