PDBsum entry 1ef1 Go to PDB code:  Pore analysis for: 1ef1 calculated with MOLE 2.0 PDB id 1ef1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.44 3.12 27.6 -1.96 -0.85 24.9 86 2 6 4 1 0 0 0  MSE 577 C 2 1.95 3.67 57.3 -1.62 -0.46 21.6 79 6 5 5 3 4 2 0  MSE 12 A 3 1.97 3.55 67.9 -2.63 -0.78 30.7 82 9 7 7 3 0 0 0  MSE 12 A MSE 577 D 4 1.74 1.74 96.1 -2.06 -0.56 24.8 80 8 10 7 4 3 2 0  MSE 577 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.