PDBsum entry 1ebv Go to PDB code:  Tunnel analysis for: 1ebv calculated with MOLE 2.0 PDB id 1ebv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.69 3.25 24.2 1.55 0.69 6.6 72 2 0 1 12 4 0 0  SCL 700 A 2 1.69 3.25 24.2 1.55 0.69 6.6 72 2 0 1 12 4 0 0  SCL 700 A 3 1.69 3.25 27.6 1.72 0.73 4.5 68 1 0 1 11 5 0 0  SCL 700 A 4 1.42 1.42 28.0 0.36 0.08 5.5 73 3 0 2 4 4 0 0  SCL 700 A 5 1.17 1.15 30.5 0.56 0.20 2.8 64 1 0 1 5 5 1 0  OAS 530 A SCL 700 A 6 1.69 3.25 27.6 1.72 0.73 4.5 68 1 0 1 11 5 0 0  SCL 700 A 7 1.42 1.42 28.0 0.36 0.08 5.5 73 3 0 2 4 4 0 0  SCL 700 A 8 1.17 1.15 30.5 0.56 0.20 2.8 64 1 0 1 5 5 1 0  OAS 530 A SCL 700 A 9 1.32 1.41 22.7 0.36 0.26 9.0 81 3 0 1 8 1 0 0  HEM 601 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.