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PDBsum entry 1e9f
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Tunnel analysis for: 1e9f calculated with  MOLE 2.0
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PDB id
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1e9f
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.53 |
1.71 |
17.0 |
-0.55 |
0.37 |
14.8 |
67 |
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4 |
0 |
0 |
0 |
5 |
0 |
0 |
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TMP 301 A
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2 |
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1.42 |
1.42 |
17.6 |
-1.27 |
-0.15 |
16.6 |
80 |
3 |
1 |
3 |
1 |
2 |
1 |
0 |
TMP 301 A MG 401 A
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3 |
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1.42 |
1.53 |
19.5 |
-0.60 |
0.06 |
18.4 |
79 |
4 |
1 |
2 |
1 |
2 |
1 |
0 |
TMP 301 A MG 401 A
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4 |
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1.17 |
2.09 |
22.1 |
-0.98 |
0.22 |
20.1 |
71 |
4 |
1 |
0 |
1 |
5 |
0 |
0 |
TMP 301 A
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5 |
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1.42 |
1.42 |
24.6 |
-0.16 |
0.45 |
11.3 |
67 |
4 |
0 |
2 |
1 |
6 |
1 |
0 |
TMP 301 A
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6 |
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1.17 |
2.33 |
24.6 |
-1.04 |
-0.03 |
22.6 |
81 |
4 |
2 |
2 |
2 |
2 |
1 |
0 |
TMP 301 A MG 401 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program