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PDBsum entry 1e8u

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1e8u calculated with MOLE 2.0 PDB id
1e8u
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.31 19.8 -1.28 -0.60 17.4 85 1 1 2 2 2 1 0  
2 3.11 7.1 0.09 -0.19 9.4 85 2 1 0 2 1 0 0  
3 1.49 14.9 -0.64 -0.21 9.3 73 2 0 2 1 2 1 1  
4 1.46 16.6 -0.34 -0.10 8.2 73 2 0 2 1 2 1 0  
5 1.29 7.0 0.04 -0.37 9.9 98 0 1 0 2 0 0 0  
6 1.81 10.3 -0.71 -0.13 10.5 87 1 1 1 2 1 0 0  
7 1.96 9.5 -0.31 -0.02 12.7 89 1 2 1 2 1 0 0  
8 2.74 10.5 -0.67 -0.11 14.8 86 2 2 1 2 1 0 0  
9 1.57 6.3 -1.91 -0.45 20.7 69 3 0 0 0 1 0 0  
10 1.51 7.3 0.61 -0.10 2.2 78 0 0 0 3 0 2 0  
11 1.27 6.9 -0.22 0.11 14.4 83 0 1 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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