PDBsum entry 1e7f

Pore analysis for: 1e7f calculated with

MOLE 2.0

PDB id

1e7f

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

1 pore, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.48

3.15

28.5

1.33

0.49

5.7

82

2

0

1

7

2

0

0

DAO 1004 A

2

1.60

2.90

44.4

1.26

0.51

12.8

74

5

4

1

13

3

1

0

DAO 1002 A DAO 1008 A

3

1.26

1.32

45.6

1.38

0.59

6.6

69

6

0

1

9

5

0

3

DAO 1005 A

4

1.60

1.75

57.0

-1.47

-0.23

23.1

83

10

5

4

6

2

1

0

DAO 1002 A

5

2.14

3.51

58.0

-0.27

-0.08

14.0

85

5

3

7

15

3

1

0

DAO 1003 A DAO 1004 A DAO 1006 A

6

1.61

1.89

68.3

-0.05

0.14

11.3

74

6

2

4

10

5

0

2

DAO 1002 A DAO 1008 A

7

1.68

1.80

72.4

-0.94

-0.07

18.6

82

10

5

6

11

3

2

0

DAO 1002 A DAO 1003 A DAO 1004 A

8

1.36

2.81

74.5

-0.63

-0.15

17.8

85

9

4

6

12

2

0

0

DAO 1006 A

9

1.58

1.67

79.8

-0.79

-0.13

18.7

83

11

6

5

13

3

1

0

DAO 1002 A DAO 1006 A

10

1.39

3.70

89.4

-1.15

-0.19

22.7

73

8

7

3

7

6

1

3

11

1.42

3.14

116.8

-1.29

-0.18

24.3

75

12

11

3

7

7

2

3

DAO 1002 A

12

1.36

3.34

129.6

-1.00

-0.20

21.9

77

11

10

6

12

8

1

3

DAO 1006 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.