PDBsum entry 1e79 Go to PDB code:  Pore analysis for: 1e79 calculated with MOLE 2.0 PDB id 1e79 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   25 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.43 31.2 -1.63 -0.38 23.2 78 5 4 1 3 2 1 0   2 1.37 1.65 57.0 -1.70 -0.36 24.0 78 6 5 2 7 1 1 0   3 1.34 1.37 73.4 -1.11 -0.43 17.9 82 6 7 5 11 0 1 0   4 1.32 1.49 74.3 -1.17 -0.46 15.9 76 6 6 1 7 3 6 0   5 1.57 3.19 77.0 -1.23 -0.24 18.1 77 5 9 4 11 3 2 0   6 1.52 1.50 79.9 -1.68 -0.52 25.7 81 9 8 3 7 0 1 0   7 1.33 1.37 84.5 -1.13 -0.10 20.4 76 8 7 2 10 4 2 0   8 3.18 3.19 85.7 -1.83 -0.41 24.8 86 7 9 9 6 2 1 0   9 1.53 1.76 86.7 -0.88 -0.20 18.1 86 10 8 4 12 1 3 0   10 1.49 1.59 90.2 -0.57 -0.12 20.2 84 8 13 5 13 3 0 0  ADP 600 D DCW 700 D 11 1.22 1.27 98.1 -0.87 -0.25 12.3 79 7 4 5 9 7 3 0   12 1.83 1.88 97.4 -1.65 -0.40 26.6 84 11 9 5 10 1 1 0   13 1.84 1.86 108.9 -2.00 -0.51 24.7 86 12 10 9 6 1 2 0   14 1.41 2.37 111.2 -0.52 -0.20 17.4 86 12 11 3 15 2 3 0  ADP 600 D DCW 700 D 15 1.30 1.52 115.1 -1.23 -0.38 20.1 82 10 11 4 14 4 3 0   16 1.57 1.79 116.7 -1.71 -0.47 23.4 86 12 12 7 7 1 4 0   17 1.27 1.34 131.3 -1.60 -0.42 19.7 81 14 10 10 9 7 4 0   18 1.17 1.17 137.6 -1.10 -0.26 17.7 79 13 8 5 12 6 4 0   19 1.22 1.29 140.1 -1.38 -0.31 21.1 80 13 12 8 13 7 3 0   20 1.34 1.68 139.6 -0.85 -0.36 19.2 83 12 14 3 17 5 3 0  ADP 600 D DCW 700 D 21 1.36 1.41 139.1 -1.42 -0.39 24.2 87 12 17 9 12 3 1 0  ADP 600 D DCW 700 D 22 1.59 1.91 139.0 -1.74 -0.44 25.7 83 17 14 5 12 2 3 0   23 1.34 1.59 145.1 -1.89 -0.58 24.6 83 12 15 7 10 4 4 0   24 1.53 1.80 148.7 -1.50 -0.42 23.5 86 16 15 5 12 0 4 0   25 2.09 2.52 170.2 -2.24 -0.52 28.4 81 19 14 8 7 4 2 0   26 1.84 1.91 171.8 -1.67 -0.38 24.4 80 16 9 2 8 3 2 0   27 2.13 2.36 179.0 -1.90 -0.41 28.2 80 18 16 6 11 4 1 0   28 1.51 2.70 198.6 -1.34 -0.32 23.9 82 19 16 5 13 5 1 0  ADP 600 D DCW 700 D 29 1.58 2.83 53.7 -1.66 -0.50 25.6 75 2 6 1 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.