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PDBsum entry 1e55

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1e55 calculated with MOLE 2.0 PDB id
1e55
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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13 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.25 24.4 -2.15 -0.63 26.5 87 4 2 6 1 1 0 0  
2 2.14 24.6 -2.05 -0.61 24.4 87 4 2 7 1 1 0 0  
3 1.83 4.4 -1.99 -0.01 19.2 69 2 1 0 1 1 1 0  
4 1.34 18.1 -0.51 0.15 6.5 78 1 0 4 3 3 0 0  
5 1.77 6.4 -1.91 -0.66 24.4 84 0 3 0 1 1 0 0  
6 1.77 8.2 -2.61 -0.62 33.1 82 2 3 0 1 1 0 0  
7 1.79 11.0 -0.73 -0.34 18.0 76 2 3 1 4 0 0 0  
8 1.53 6.3 -2.39 -0.28 27.7 71 1 2 0 0 1 0 0  
9 1.89 8.5 -1.03 -0.26 19.1 73 2 2 1 3 0 0 0  
10 1.67 7.4 -1.64 -0.42 18.1 72 1 3 0 0 1 0 0  
11 1.51 7.4 -1.37 0.26 9.2 52 2 0 0 0 3 0 0  
12 1.47 4.8 -0.35 0.42 4.3 51 1 0 0 0 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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