PDBsum entry 1e2d Go to PDB code:  Tunnel analysis for: 1e2d calculated with MOLE 2.0 PDB id 1e2d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.40 31.5 -1.11 -0.05 23.7 82 6 3 3 2 3 0 0  TMP 301 A ADP 302 A MG 401 A MG 403 A 2 1.17 1.47 46.8 -0.24 0.10 13.6 77 4 2 4 5 4 0 0  TMP 301 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.