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PDBsum entry 1e1r

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Pore analysis for: 1e1r calculated with MOLE 2.0 PDB id
1e1r
Pores calculated on whole structure Pores calculated excluding ligands

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26 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.52 44.5 -1.73 -0.45 26.3 78 6 4 1 4 1 1 0  
2 1.64 1.95 45.2 -1.12 -0.26 19.9 73 3 6 0 5 3 1 0  
3 1.29 1.37 59.4 -0.96 -0.42 13.0 75 3 4 1 6 3 6 0  
4 1.33 1.36 79.5 -0.89 -0.20 22.4 85 8 9 4 10 2 1 0  ADP 600 D
5 1.34 1.57 81.0 -1.37 -0.26 22.6 83 5 6 7 6 2 0 0  PO4 602 E
6 2.73 4.59 91.4 -2.39 -0.60 33.0 84 10 11 6 5 0 1 0  
7 1.55 1.70 93.7 -1.42 -0.53 22.3 86 7 10 5 9 0 3 0  
8 1.63 1.82 98.0 -1.47 -0.50 22.1 86 10 12 4 10 0 4 0  
9 1.31 1.31 125.6 -1.17 -0.38 16.5 80 7 10 7 9 7 3 0  PO4 602 E
10 1.27 1.27 126.0 -1.49 -0.38 20.4 78 10 10 6 8 7 4 0  
11 1.47 1.47 127.2 -1.63 -0.50 24.7 81 11 14 3 10 3 2 0  
12 1.31 3.21 124.5 -1.56 -0.46 26.2 84 10 10 5 9 1 0 0  
13 2.02 2.99 128.7 -1.03 -0.29 20.8 82 6 8 4 9 3 0 0  ANP 600 F
14 1.48 1.51 131.5 -1.78 -0.51 25.9 82 14 16 2 11 3 3 0  
15 1.44 1.60 134.1 -0.77 -0.25 17.2 79 8 10 3 16 8 2 0  PO4 602 E
16 1.57 3.13 130.4 -2.15 -0.43 29.2 84 13 15 10 8 2 1 0  
17 1.41 1.57 148.2 -1.68 -0.36 26.4 83 9 16 8 11 4 1 0  PO4 602 E
18 1.76 3.02 156.9 -1.83 -0.68 25.3 83 8 14 11 5 1 2 1  
19 1.54 1.75 167.5 -1.17 -0.36 20.8 84 13 18 8 17 3 4 0  
20 2.15 3.01 163.5 -1.29 -0.34 22.0 84 12 11 8 14 3 1 0  ANP 600 F
21 1.45 1.45 184.9 -1.36 -0.38 22.0 80 13 20 6 15 6 3 0  
22 1.23 1.23 200.6 -1.40 -0.39 19.8 79 13 19 8 12 9 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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