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PDBsum entry 1dzi

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Top Page protein metals Protein-protein interface(s) links
Integrin PDB id
1dzi
Contents
Protein chains
185 a.a. *
22 a.a. *
Metals
_CO
Waters ×404
* Residue conservation analysis

References listed in PDB file
Key reference
Title Structural basis of collagen recognition by integrin alpha2beta1.
Authors J.Emsley, C.G.Knight, R.W.Farndale, M.J.Barnes, R.C.Liddington.
Ref. Cell, 2000, 101, 47-56. [DOI no: 10.1016/S0092-8674(00)80622-4]
PubMed id 10778855
Abstract
We have determined the crystal structure of a complex between the I domain of integrin alpha2beta1 and a triple helical collagen peptide containing a critical GFOGER motif. Three loops on the upper surface of the I domain that coordinate a metal ion also engage the collagen, with a collagen glutamate completing the coordination sphere of the metal. Comparison with the unliganded I domain reveals a change in metal coordination linked to a reorganization of the upper surface that together create a complementary surface for binding collagen. Conformational changes propagate from the upper surface to the opposite pole of the domain, suggesting both a basis for affinity regulation and a pathway for signal transduction. The structural features observed here may represent a general mechanism for integrin-ligand recognition.
Figure 3.
Figure 3. Two Conformations of the Integrin α2-I Domain
Figure 4.
Figure 4. Comparison of Conformational Changes in the α2- and αM-I Domains
The above figures are reprinted by permission from Cell Press: Cell (2000, 101, 47-56) copyright 2000.
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