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PDBsum entry 1dqo

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Sugar binding protein PDB id
1dqo
Contents
Protein chain
134 a.a. *
Ligands
ASG
Waters ×153
* Residue conservation analysis

References listed in PDB file
Key reference
Title Crystal structure of the cysteine-Rich domain of mannose receptor complexed with a sulfated carbohydrate ligand.
Authors Y.Liu, A.J.Chirino, Z.Misulovin, C.Leteux, T.Feizi, M.C.Nussenzweig, P.J.Bjorkman.
Ref. J Exp Med, 2000, 191, 1105-1116.
PubMed id 10748229
Abstract
The macrophage and epithelial cell mannose receptor (MR) binds carbohydrates on foreign and host molecules. Two portions of MR recognize carbohydrates: tandemly arranged C-type lectin domains facilitate carbohydrate-dependent macrophage uptake of infectious organisms, and the NH(2)-terminal cysteine-rich domain (Cys-MR) binds to sulfated glycoproteins including pituitary hormones. To elucidate the mechanism of sulfated carbohydrate recognition, we determined crystal structures of Cys-MR alone and complexed with 4-sulfated-N-acetylgalactosamine at 1.7 and 2.2 A resolution, respectively. Cys-MR folds into an approximately three-fold symmetric beta-trefoil shape resembling fibroblast growth factor. The sulfate portions of 4-sulfated-N-acetylgalactosamine and an unidentified ligand found in the native crystals bind in a neutral pocket in the third lobe. We use the structures to rationalize the carbohydrate binding specificities of Cys-MR and compare the recognition properties of Cys-MR with other beta-trefoil proteins.
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 Headers

 

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