PDBsum entry 1do2 Go to PDB code:  Pore analysis for: 1do2 calculated with MOLE 2.0 PDB id 1do2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.53 33.7 -1.50 -0.15 28.8 87 7 2 2 6 0 0 0   2 1.56 1.56 41.4 -0.85 -0.14 24.1 76 7 5 1 5 1 0 0   3 1.58 1.58 46.8 -0.67 -0.30 18.6 83 3 3 3 5 0 0 0   4 1.48 1.50 54.1 -1.22 -0.09 23.5 83 7 6 3 3 1 1 0   5 1.28 3.22 57.6 -0.99 -0.10 21.0 84 6 5 4 6 1 1 0   6 1.61 1.61 78.7 -1.69 -0.36 25.4 79 7 6 3 5 1 0 0   7 1.32 1.51 85.8 -1.72 -0.25 26.4 82 8 5 3 7 1 0 0   8 1.30 1.57 87.5 -2.52 -0.30 33.2 83 11 6 5 5 1 0 0   9 1.33 1.72 110.2 -2.40 -0.46 29.3 79 11 8 6 4 1 0 0   10 1.24 1.24 128.0 -2.12 -0.44 27.4 82 12 10 6 6 2 1 0   11 1.32 1.58 142.1 -2.62 -0.47 30.9 78 15 11 6 4 2 0 0   12 1.11 1.40 25.6 -0.53 -0.12 16.1 83 3 1 2 6 0 0 0   13 1.10 1.39 27.1 -1.22 -0.14 23.0 81 4 1 1 4 0 1 0   14 1.27 1.27 28.7 -2.36 -0.74 24.8 82 2 4 3 1 0 2 0   15 1.29 1.30 30.5 -1.68 -0.58 20.6 80 2 4 3 3 1 2 0   16 2.13 3.14 39.6 -2.68 -0.50 29.3 76 8 4 2 2 1 0 0   17 1.77 2.26 42.0 -1.54 -0.38 26.8 84 6 4 2 4 1 0 1   18 1.44 1.49 128.0 -1.34 -0.28 21.1 82 7 8 8 10 3 1 0   19 1.29 1.28 161.9 -1.65 -0.41 24.9 82 11 14 6 12 3 1 0   20 1.34 1.55 33.6 0.21 0.13 15.9 74 4 3 2 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.