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PDBsum entry 1dmx

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Top Page protein metals Protein-protein interface(s) clefts links
Cleft analysis for: 1dmx PDB id
1dmx
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 6521.34 3.68 63.92 4 12.55 1 17.72 1 19 10 23 21 14 17 2  
2 1769.77 0.00 62.94 5 8.77 4 12.31 2 6 5 9 6 9 3 0  
3 1106.16 0.00 55.70 10 10.18 2 11.03 3 2 3 2 4 3 1 0  
4 825.19 0.00 66.51 2 6.80 7 7.60 5 5 2 6 2 2 4 0  
5 702.00 0.00 58.49 7 8.49 6 6.74 9 4 1 3 4 0 2 2  
6 527.77 0.00 73.34 1 8.83 3 7.51 6 3 2 6 2 2 4 0  
7 492.33 0.00 64.82 3 8.51 5 7.40 8 1 2 1 4 3 2 1  
8 551.39 0.00 60.87 6 5.32 9 7.92 4 4 2 3 6 0 1 0  
9 537.05 0.00 56.64 8 5.20 10 7.46 7 4 2 3 5 0 1 0  
10 520.59 0.00 56.35 9 6.11 8 6.40 10 4 5 3 0 5 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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