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PDBsum entry 1dmt
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Pore analysis for: 1dmt calculated with  MOLE 2.0
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PDB id
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1dmt
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.70 |
2.03 |
36.0 |
-1.59 |
-0.39 |
18.6 |
84 |
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3 |
3 |
5 |
2 |
3 |
1 |
0 |
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RDF 750 A
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2 |
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2.02 |
3.41 |
37.3 |
-2.00 |
-0.60 |
19.8 |
89 |
4 |
3 |
6 |
0 |
2 |
0 |
0 |
RDF 750 A GOL 751 A
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3 |
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1.69 |
1.80 |
50.9 |
-1.84 |
-0.18 |
20.3 |
73 |
7 |
3 |
4 |
1 |
7 |
0 |
0 |
RDF 750 A GOL 751 A
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4 |
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1.75 |
2.03 |
52.2 |
-1.99 |
-0.47 |
19.3 |
89 |
5 |
4 |
7 |
1 |
3 |
1 |
0 |
RDF 750 A GOL 751 A
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5 |
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1.69 |
1.77 |
58.0 |
-1.54 |
-0.16 |
18.0 |
77 |
7 |
4 |
5 |
2 |
7 |
1 |
0 |
RDF 750 A GOL 751 A
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6 |
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1.69 |
1.82 |
62.4 |
-1.94 |
-0.21 |
19.7 |
79 |
7 |
4 |
5 |
1 |
7 |
0 |
0 |
RDF 750 A GOL 751 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program