PDBsum entry 1djx

Tunnel analysis for: 1djx calculated with

MOLE 2.0

PDB id

1djx

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

5 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.76

1.76

15.5

-1.25

-0.43

15.7

75

2

1

1

0

1

0

0

2

1.14

1.14

44.3

-1.42

-0.51

14.2

73

4

2

2

1

2

2

0

ACT 5 A

3

1.34

1.64

17.7

-1.92

-0.38

21.9

75

2

1

1

2

2

1

0

4

1.35

1.64

23.9

-1.60

-0.40

18.4

82

2

2

1

2

2

0

0

5

1.19

1.18

32.4

-1.23

-0.47

14.8

73

4

1

1

2

2

2

0

ACT 5 B

6

1.73

1.73

33.0

-1.01

-0.47

12.3

75

2

1

3

4

1

1

0

7

1.40

1.60

22.3

-1.17

-0.19

20.0

83

3

2

1

3

1

0

0

8

1.91

1.91

15.1

-0.58

-0.75

4.3

84

1

0

1

0

1

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.