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PDBsum entry 1djj

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Cleft analysis for: 1djj PDB id
1djj
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 10797.47 3.25 69.86 2 13.30 1 24.48 1 26 15 34 37 20 25 4 BOG 702, NSA 0 (21 atoms)
2 3317.62 0.00 68.55 3 11.09 2 11.30 2 11 6 8 16 8 5 0 HEM 601 (43 atoms)
3 1874.39 0.00 63.67 6 7.32 5 7.73 7 6 2 10 6 6 8 0  
4 1007.02 0.00 57.80 8 4.93 9 8.21 5 6 3 2 4 1 4 1  
5 553.08 0.00 67.83 5 10.35 3 6.78 9 4 2 3 4 1 0 0  
6 542.53 0.00 54.29 10 5.28 7 8.77 3 2 0 1 5 1 4 0  
7 646.73 0.00 68.35 4 5.61 6 6.75 10 2 2 5 1 4 4 1 NAG 661[A] (4 atoms)
8 688.92 0.00 75.03 1 8.05 4 7.55 8 0 3 8 8 2 2 0  
9 665.30 0.00 58.28 7 3.73 10 7.96 6 6 3 2 1 1 3 0  
10 516.38 0.00 56.16 9 5.23 8 8.70 4 1 1 2 1 2 2 2  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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