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PDBsum entry 1djg

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1djg calculated with MOLE 2.0 PDB id
1djg
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.63 209.4 -2.58 -0.58 25.6 85 9 7 9 3 2 0 0  
2 1.61 1.98 209.5 -3.05 -0.65 34.5 82 11 10 5 2 1 0 0  
3 1.44 1.64 44.3 -1.96 -0.27 19.4 74 4 4 2 1 2 2 0  
4 1.24 1.24 58.1 -1.23 -0.34 12.9 75 4 2 3 1 3 3 1  
5 1.24 1.24 60.4 -1.56 -0.58 13.1 79 2 3 4 0 3 3 1  
6 2.11 2.20 37.4 -1.54 -0.36 24.4 80 3 2 2 3 1 0 0  
7 1.97 4.48 43.9 -0.77 -0.25 10.5 83 3 0 6 4 2 1 0  
8 1.97 4.49 52.5 -0.98 -0.33 14.9 82 4 2 5 4 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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