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PDBsum entry 1diy

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Tunnel analysis for: 1diy calculated with MOLE 2.0 PDB id
1diy
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.31 46.9 1.22 0.28 2.7 77 2 0 4 12 4 0 1  700 ACD A
2 1.26 53.0 0.89 0.44 9.4 76 3 1 1 14 3 0 1  700 ACD A,751 BOG A,752 BOG A
3 1.33 58.8 1.28 0.33 2.3 71 2 0 2 15 7 1 1  700 ACD A
4 1.95 17.0 0.15 0.32 11.3 74 2 0 1 6 3 0 0  601 COH A
5 2.33 20.0 -1.07 -0.02 20.7 84 4 1 2 3 3 0 0  601 COH A
6 1.49 12.6 -1.21 -0.18 29.5 66 2 2 0 4 1 0 0  
7 1.29 7.7 -0.04 0.31 25.3 75 1 1 0 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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