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PDBsum entry 1diy

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Cleft analysis for: 1diy PDB id
1diy
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 11458.12 2.85 68.20 5 12.57 1 25.10 1 28 15 36 37 22 24 6 BOG 750[A], BOG 751[A], BOG 752[A],
BOG 753[A] (46 atoms)
2 4020.47 0.00 68.82 4 12.45 2 12.15 2 16 8 12 23 8 8 0 COH 601[A] (43 atoms)
3 1749.94 0.00 62.76 6 8.35 6 8.67 5 6 2 10 5 5 7 0  
4 656.44 0.00 52.11 9 5.75 7 9.32 4 2 0 1 5 2 2 0  
5 589.36 0.00 69.89 3 9.40 4 8.28 8 4 2 3 4 1 1 0  
6 637.88 0.00 47.48 10 3.99 10 9.35 3 2 2 3 1 0 5 0  
7 441.70 0.00 74.11 2 8.95 5 8.29 7 2 2 3 2 3 4 1  
8 433.27 0.00 95.74 1 9.88 3 0.00 10 1 0 2 11 6 1 0 ACD 700[A] (15 atoms)
9 447.61 0.00 54.06 8 4.89 9 6.10 9 1 1 2 1 2 2 2  
10 373.78 0.00 58.76 7 5.51 8 8.40 6 2 1 1 3 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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