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PDBsum entry 1dhb

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 1dhb PDB id
1dhb
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5672.95 2.96 67.92 3 11.16 2 17.76 1 14 11 17 26 8 8 0  
2 1916.16 0.00 72.79 1 10.81 3 13.91 3 8 2 5 14 6 3 0 HEM 1[B] (44 atoms)
3 2038.08 0.00 69.69 2 11.49 1 14.35 2 7 2 6 16 4 3 0 HEM 1[A] (43 atoms)
4 709.17 0.00 61.50 8 6.03 8 9.14 4 1 1 6 8 0 2 0  
5 396.56 0.00 66.86 4 10.36 4 8.79 5 2 1 2 4 0 1 0  
6 411.33 0.00 66.67 5 6.61 5 5.68 8 4 2 2 2 1 3 0  
7 259.45 0.00 49.84 10 1.95 10 6.55 6 2 2 1 0 0 1 0  
8 331.59 0.00 64.34 6 3.74 9 6.32 7 2 3 0 3 1 1 0  
9 258.61 0.00 57.30 9 6.52 6 5.41 9 1 2 2 1 2 2 0  
10 231.61 0.00 63.62 7 6.15 7 0.00 10 1 1 1 4 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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