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PDBsum entry 1de7

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1de7 calculated with MOLE 2.0 PDB id
1de7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.65 1.87 17.3 0.27 -0.37 6.9 77 0 2 0 3 1 0 1  AR7 37 A
2 1.26 1.26 30.4 -1.16 -0.69 16.1 82 4 4 0 2 2 1 0  AR7 37 A NA 1 H
3 1.31 1.86 24.3 -0.11 0.04 9.6 81 3 1 1 7 3 0 0  
4 1.31 1.44 22.6 0.22 -0.02 9.1 83 2 1 1 7 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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