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PDBsum entry 1ddx

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Top Page protein ligands Protein-protein interface(s) links
Protein chain A    -    representing identical chains: B C D PDB id
1ddx
Protein chain A highlighted
(click to view)
 
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
2 sheets
2 beta hairpins
4 strands
30 helices
57 helix-helix interacs
53 beta turns
17 gamma turns
5 disulphides
Catalytic residues
V291
Q203-H207-Y385
  
Residue conservation: Chain & (552 residues)

UniProt code: Q05769   [Pfam]

Sequence coloured by residue conservation:

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
Disulphides:   
    disulphide bond
CSA annotation:   
    catalytic residue
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1  AC2  AC3  AC4  AC5
 AC6  AC7  AC8  AC9  BC1
 BC2  BC3  BC4  BC5  BC6
 BC7  BC8  BC9  CC1  CC2
 CC3  CC4  CC5  CC6
Conservation colouring:     Low 1 2 3 4 5 6 7 8 9 High
View:
Protein surface showing most poorly (1) and highly conserved (7 8 9) regions
ConSurf representation of conserved regions: 1 2 3 4 5 6 7 8 9
Download tab-separated text file of ConSurf analysis
Generate Raster3D image of surface coloured by conservation
ConSurf-DB ConSurf-DB data (including mult seq alignment) for 1ddx, chain A
Residue conservation calculated by ConSurf-DB.
  
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