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PDBsum entry 1dds

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1dds calculated with MOLE 2.0 PDB id
1dds
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.59 25.2 -0.16 -0.30 9.9 86 1 2 1 3 2 0 0  MTX 201 B
2 1.43 1.58 25.7 0.38 0.02 6.7 79 1 1 2 4 3 1 0  MTX 201 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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