PDBsum entry 1d9z Go to PDB code:  Pore analysis for: 1d9z calculated with MOLE 2.0 PDB id 1d9z Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.95 25.2 0.43 0.30 11.0 85 2 1 1 6 1 0 0   2 1.40 1.50 29.3 -1.38 -0.04 20.8 86 3 2 3 6 1 0 0   3 1.11 1.37 36.2 0.44 0.04 12.2 77 2 4 1 8 4 0 0   4 1.42 2.43 54.6 -0.64 -0.23 20.7 83 2 6 2 8 0 1 0  ATP 700 A 5 1.22 1.36 103.5 -1.73 -0.43 25.6 77 8 9 2 3 6 1 1   6 1.38 1.38 108.3 -0.90 -0.16 21.4 76 7 8 3 7 6 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.