PDBsum entry 1d9k Go to PDB code:  Pore analysis for: 1d9k calculated with MOLE 2.0 PDB id 1d9k Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.79 26.2 -0.35 0.16 17.4 79 3 2 2 3 3 0 0   2 1.36 1.42 29.3 -2.65 -0.73 21.0 85 1 3 4 0 1 0 0   3 1.79 2.89 45.9 -1.60 -0.54 14.0 95 4 1 6 1 1 0 0   4 1.26 1.32 71.7 -2.40 -0.45 24.7 85 8 4 5 2 2 0 0   5 1.28 1.34 102.8 -1.91 -0.42 24.6 81 7 9 5 5 3 1 0   6 1.59 1.63 29.5 0.55 0.01 1.8 82 0 0 5 5 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.