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PDBsum entry 1d9f
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Tunnel analysis for: 1d9f calculated with  MOLE 2.0
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PDB id
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1d9f
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.52 |
1.52 |
17.1 |
-0.03 |
-0.10 |
2.5 |
83 |
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0 |
0 |
1 |
4 |
1 |
0 |
0 |
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2 |
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1.29 |
1.33 |
18.0 |
0.20 |
-0.05 |
7.4 |
78 |
1 |
0 |
2 |
5 |
2 |
0 |
0 |
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3 |
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1.23 |
1.35 |
20.0 |
0.33 |
0.07 |
2.3 |
83 |
0 |
0 |
1 |
4 |
1 |
0 |
0 |
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4 |
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1.49 |
1.50 |
27.0 |
-0.93 |
-0.33 |
14.1 |
77 |
3 |
1 |
1 |
5 |
1 |
0 |
0 |
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5 |
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1.23 |
1.43 |
29.8 |
-0.54 |
-0.19 |
12.7 |
78 |
3 |
1 |
1 |
6 |
1 |
0 |
0 |
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6 |
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1.51 |
1.51 |
37.3 |
0.01 |
0.18 |
14.8 |
82 |
4 |
3 |
1 |
5 |
2 |
0 |
0 |
SO4 38 A
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7 |
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1.24 |
1.43 |
40.1 |
0.22 |
0.25 |
13.9 |
81 |
4 |
3 |
1 |
4 |
2 |
0 |
0 |
SO4 38 A
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8 |
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1.31 |
1.31 |
15.6 |
2.66 |
0.94 |
0.9 |
68 |
0 |
0 |
0 |
4 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program