PDBsum entry 1d8c Go to PDB code:  Pore analysis for: 1d8c calculated with MOLE 2.0 PDB id 1d8c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.60 25.8 -0.20 -0.35 11.8 87 0 1 3 6 1 0 0  MSE 294 A 2 2.03 2.03 45.6 -1.17 -0.39 12.6 72 3 4 3 2 3 2 1  MSE 508 A MSE 629 A 3 2.07 2.11 60.7 -1.51 -0.54 17.6 79 7 5 5 3 2 2 0  MSE 461 A MSE 465 A MSE 470 A MSE 476 A SOR 4000 A 4 1.97 2.45 66.4 -0.65 -0.27 10.2 79 5 5 3 6 3 3 1  MSE 461 A MSE 465 A MSE 470 A MSE 476 A MSE 508 A MSE 629 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.