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PDBsum entry 1d5r

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Cleft analysis for: 1d5r PDB id
1d5r
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1924.59 0.87 64.42 4 11.33 2 9.91 2 7 4 6 6 4 4 0  
2 2207.67 0.00 66.97 2 10.38 3 9.78 3 13 5 7 8 5 6 2 TLA 1352[A] (10 atoms)
3 1364.34 0.00 66.36 3 11.36 1 9.61 4 6 6 4 4 4 3 0  
4 802.41 0.00 60.05 8 9.85 4 8.91 6 2 0 1 5 3 2 0  
5 699.47 0.00 68.66 1 9.54 5 8.26 7 5 1 1 6 3 1 0  
6 677.95 0.00 49.69 10 3.95 10 10.17 1 4 2 1 2 4 0 0  
7 549.28 0.00 61.07 7 6.15 9 6.72 8 2 2 4 2 1 2 0  
8 599.06 0.00 63.94 5 8.76 7 6.15 9 4 2 2 4 2 2 0  
9 533.25 0.00 63.07 6 7.89 8 5.33 10 4 3 0 2 3 1 0  
10 513.00 0.00 54.34 9 9.49 6 9.43 5 4 1 0 1 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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