PDBsum entry 1d3v Go to PDB code:  Tunnel analysis for: 1d3v calculated with MOLE 2.0 PDB id 1d3v Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.48 19.6 -2.11 -0.58 27.1 94 3 4 4 1 0 0 0  ABH 552 B 2 1.39 1.44 21.1 -2.13 -0.57 29.0 93 3 5 4 1 0 0 0  ABH 551 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.