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PDBsum entry 1d3c

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Cleft analysis for: 1d3c PDB id
1d3c
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3750.05 1.47 72.73 1 14.38 1 14.54 1 6 10 22 15 9 14 0 GLC 708[A], GLC 709[A], GLC 710[A],
GLC 715[A] (32 atoms)
2 2546.02 0.00 72.62 2 12.59 2 10.04 3 10 7 12 5 9 5 0 GLC 693[A], GLC 694[A], GLC 695[A],
GLC 696[A], GLC 697[A], GLC 698[
A] (58 atoms)
3 1265.62 0.00 64.61 7 10.19 5 7.67 8 3 5 8 7 4 3 0  
4 1069.88 0.00 53.67 10 7.71 9 8.58 5 1 3 8 4 4 2 0  
5 629.86 0.00 67.78 5 10.06 6 10.42 2 3 3 5 5 1 1 0  
6 818.02 0.00 61.76 9 10.63 4 8.48 6 5 1 7 5 1 3 0  
7 579.66 0.00 69.02 4 11.56 3 8.93 4 4 2 6 3 1 0 0  
8 521.44 0.00 62.29 8 6.61 10 7.27 10 3 0 8 2 1 0 0  
9 537.05 0.00 65.40 6 9.95 7 7.70 7 2 1 5 4 0 3 0  
10 454.78 0.00 69.90 3 8.93 8 7.37 9 0 0 6 6 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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