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PDBsum entry 1d2e
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Pore analysis for: 1d2e calculated with  MOLE 2.0
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PDB id
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1d2e
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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22 pores,
coloured by radius |
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25 pores,
coloured by radius
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25 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.78 |
4.45 |
33.0 |
-2.36 |
-0.79 |
29.2 |
81 |
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4 |
6 |
0 |
0 |
0 |
1 |
0 |
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2 |
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3.06 |
3.18 |
33.2 |
-2.19 |
-0.65 |
28.2 |
75 |
5 |
6 |
1 |
1 |
0 |
1 |
0 |
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3 |
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3.48 |
3.48 |
45.5 |
-2.30 |
-0.63 |
29.8 |
75 |
8 |
8 |
1 |
1 |
0 |
1 |
0 |
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4 |
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2.93 |
2.93 |
47.0 |
-2.44 |
-0.72 |
30.4 |
75 |
7 |
7 |
0 |
0 |
0 |
2 |
0 |
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5 |
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2.29 |
2.86 |
48.1 |
-2.82 |
-0.62 |
28.0 |
78 |
8 |
6 |
3 |
1 |
0 |
3 |
0 |
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6 |
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2.78 |
3.64 |
50.5 |
-2.51 |
-0.62 |
31.7 |
72 |
7 |
5 |
1 |
1 |
0 |
4 |
0 |
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7 |
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2.78 |
3.71 |
50.8 |
-2.78 |
-0.65 |
35.9 |
73 |
9 |
8 |
1 |
1 |
0 |
4 |
0 |
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8 |
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2.76 |
3.66 |
52.4 |
-2.78 |
-0.59 |
36.3 |
73 |
9 |
9 |
2 |
2 |
0 |
3 |
0 |
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9 |
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2.77 |
3.75 |
56.0 |
-2.85 |
-0.66 |
36.6 |
76 |
9 |
10 |
1 |
1 |
0 |
3 |
0 |
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10 |
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2.30 |
2.92 |
66.5 |
-2.59 |
-0.59 |
22.3 |
78 |
9 |
8 |
7 |
2 |
1 |
2 |
0 |
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11 |
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2.30 |
3.24 |
70.0 |
-2.54 |
-0.63 |
21.7 |
79 |
10 |
5 |
6 |
1 |
1 |
3 |
0 |
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12 |
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2.29 |
4.47 |
31.3 |
-2.32 |
-0.67 |
29.0 |
74 |
7 |
4 |
1 |
1 |
0 |
2 |
0 |
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13 |
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2.29 |
4.44 |
35.0 |
-3.30 |
-0.56 |
42.6 |
75 |
10 |
4 |
1 |
1 |
0 |
2 |
0 |
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14 |
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2.18 |
4.99 |
37.6 |
-2.42 |
-0.41 |
33.2 |
74 |
7 |
6 |
1 |
1 |
1 |
1 |
0 |
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15 |
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2.31 |
4.53 |
39.5 |
-2.91 |
-0.52 |
35.9 |
73 |
10 |
5 |
2 |
2 |
0 |
2 |
0 |
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16 |
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2.36 |
3.79 |
43.0 |
-2.72 |
-0.48 |
35.9 |
75 |
8 |
4 |
1 |
1 |
1 |
2 |
0 |
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17 |
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2.10 |
2.14 |
47.3 |
-2.62 |
-0.64 |
33.9 |
80 |
8 |
4 |
0 |
1 |
0 |
2 |
0 |
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18 |
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2.40 |
5.09 |
47.6 |
-2.80 |
-0.60 |
37.1 |
77 |
9 |
6 |
0 |
0 |
1 |
2 |
0 |
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19 |
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2.11 |
2.15 |
47.8 |
-2.32 |
-0.60 |
28.6 |
77 |
7 |
4 |
1 |
2 |
0 |
2 |
0 |
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20 |
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1.85 |
3.08 |
48.7 |
-2.51 |
-0.56 |
25.4 |
79 |
9 |
5 |
3 |
1 |
0 |
2 |
0 |
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21 |
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1.84 |
3.10 |
50.4 |
-2.99 |
-0.53 |
33.8 |
80 |
11 |
5 |
3 |
1 |
0 |
2 |
0 |
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22 |
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1.82 |
3.14 |
51.4 |
-2.80 |
-0.64 |
33.0 |
82 |
9 |
6 |
2 |
1 |
0 |
1 |
0 |
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23 |
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2.12 |
2.17 |
52.1 |
-2.71 |
-0.62 |
33.1 |
78 |
10 |
6 |
1 |
2 |
0 |
2 |
0 |
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24 |
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2.36 |
3.75 |
55.0 |
-2.23 |
-0.64 |
25.1 |
82 |
4 |
4 |
3 |
2 |
1 |
1 |
0 |
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25 |
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2.09 |
2.13 |
56.2 |
-2.39 |
-0.71 |
29.8 |
79 |
9 |
7 |
0 |
1 |
0 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program