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PDBsum entry 1cu1

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Pore analysis for: 1cu1 calculated with MOLE 2.0 PDB id
1cu1
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.62 3.77 32.1 -1.79 -0.44 18.5 92 6 1 5 0 1 1 0  
2 1.56 1.55 39.2 -1.04 -0.44 15.7 86 3 3 1 9 0 3 0  
3 3.59 3.59 47.2 -1.63 -0.55 18.6 91 9 4 4 0 1 0 0  
4 2.06 2.05 56.2 -1.11 -0.34 15.3 90 5 3 6 8 2 7 0  
5 1.51 1.51 59.2 -1.50 -0.55 21.7 87 7 6 4 9 1 3 0  
6 3.29 3.54 58.9 -1.77 -0.53 16.4 84 8 5 5 1 2 2 0  
7 2.14 2.84 65.7 -1.30 -0.45 18.6 90 6 12 7 12 2 2 2  
8 2.19 2.97 68.4 -1.30 -0.48 15.3 92 8 5 10 4 1 1 0  
9 2.21 3.09 71.7 -1.62 -0.56 18.6 92 7 8 9 3 0 1 0  
10 2.17 2.78 75.4 -1.63 -0.47 21.0 89 13 11 9 7 2 0 1  
11 1.54 1.51 84.1 -1.49 -0.48 22.0 88 9 12 8 16 1 3 1  
12 2.91 3.41 85.6 -1.63 -0.34 19.5 88 6 5 4 4 2 0 0  
13 2.27 2.28 89.6 -0.71 -0.39 10.1 86 9 4 8 8 2 9 0  
14 1.51 1.50 93.8 -1.64 -0.51 21.8 90 8 10 10 11 0 3 0  
15 1.53 1.52 96.8 -0.67 -0.38 12.1 85 5 5 6 16 1 12 0  
16 2.15 2.81 100.0 -1.57 -0.48 19.7 90 11 15 14 10 1 1 1  
17 2.21 3.09 114.1 -0.87 -0.42 12.0 88 7 8 13 11 1 10 0  
18 1.81 1.78 148.2 -1.71 -0.53 17.1 87 13 11 13 11 1 7 1  
19 2.66 2.96 153.0 -0.63 -0.18 13.1 83 10 5 5 9 4 5 0  
20 1.83 1.79 162.4 -1.09 -0.48 9.2 85 9 4 12 12 1 16 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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