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PDBsum entry 1cpu

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Cleft analysis for: 1cpu PDB id
1cpu
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 4307.34 1.96 60.68 9 7.59 8 17.17 1 19 9 19 9 10 15 3  
2 2197.12 0.00 70.31 1 11.17 2 11.08 3 7 6 7 14 6 9 0 GLC 501[A], AGL 502[A], GLC 504[A],
GLC 505[A], HMC 503[A] (55 atoms)
3 969.05 0.00 63.93 8 11.97 1 11.96 2 4 3 5 4 3 3 0  
4 854.72 0.00 65.38 4 9.16 4 6.59 8 3 1 8 4 3 2 2  
5 619.31 0.00 65.52 3 9.40 3 7.69 4 4 3 1 3 2 0 2  
6 466.59 0.00 65.14 5 8.01 6 7.60 5 4 1 1 1 5 4 0  
7 432.42 0.00 64.74 6 8.94 5 6.78 6 2 3 5 5 1 1 0  
8 353.53 0.00 66.67 2 2.28 10 6.62 7 2 3 2 2 2 3 0  
9 283.08 0.00 64.41 7 7.94 7 0.00 10 2 0 1 4 2 0 0  
10 271.27 0.00 60.40 10 4.43 9 5.58 9 2 2 1 1 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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