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PDBsum entry 1cpa

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Cleft analysis for: 1cpa PDB id
1cpa
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1491.33 2.65 69.76 1 10.01 1 8.89 1 6 3 14 8 4 2 0 GLY 499[S], TYR 500[S] (17 atoms)
2 562.78 0.00 61.10 6 6.85 3 5.84 9 3 3 2 3 2 2 0  
3 558.98 0.00 57.91 9 6.10 5 8.61 2 2 2 6 1 1 1 0  
4 611.30 0.00 63.72 4 6.79 4 5.98 8 4 1 6 3 2 2 0  
5 340.45 0.00 54.88 10 4.51 9 6.50 6 1 0 3 3 2 0 0  
6 315.56 0.00 61.08 7 5.54 6 6.59 5 2 2 4 2 0 3 0  
7 298.69 0.00 60.82 8 5.07 8 6.62 4 3 0 3 2 2 0 0  
8 269.16 0.00 68.84 2 5.19 7 6.89 3 2 2 4 2 2 0 0  
9 225.70 0.00 66.61 3 7.32 2 6.14 7 1 1 5 1 0 0 0  
10 260.72 0.00 62.23 5 2.14 10 5.53 10 2 1 5 0 2 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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