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PDBsum entry 1cnj

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Tunnel analysis for: 1cnj calculated with MOLE 2.0 PDB id
1cnj
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.51 7.3 -0.27 -0.10 8.4 70 0 1 1 0 2 1 0  
2 2.30 8.4 -0.81 -0.42 11.7 71 1 2 1 0 2 0 0  
3 2.19 11.7 -0.83 -0.34 12.0 74 2 1 1 0 2 0 0  
4 2.33 5.4 -0.78 -0.28 19.7 67 2 1 0 2 0 0 0  
5 2.11 5.8 -1.04 -0.20 24.3 71 2 1 0 1 0 0 0  
6 2.35 7.0 -1.18 -0.43 21.9 67 2 1 0 2 0 0 0  
7 2.11 8.2 -1.36 -0.47 23.2 71 2 1 0 1 0 0 0  
8 1.53 10.2 1.32 0.19 4.0 92 0 1 0 4 0 0 0  
9 1.89 7.9 -1.62 0.07 22.5 64 2 1 1 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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