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PDBsum entry 1c8q

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Tunnel analysis for: 1c8q calculated with MOLE 2.0 PDB id
1c8q
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.32 12.3 -0.29 0.02 22.9 86 3 2 1 2 0 0 0  
2 2.16 13.3 -0.38 0.29 15.0 78 2 1 0 2 1 0 0  
3 3.08 7.3 -2.71 -0.42 23.1 76 2 2 1 0 1 0 0  
4 2.91 7.3 -2.92 -0.69 21.1 87 2 2 2 0 0 0 0  
5 2.22 5.6 -0.19 -0.24 4.0 74 0 1 1 1 1 1 0  
6 1.37 12.4 -1.51 -0.60 22.5 81 2 2 1 1 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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