PDBsum entry 1c5l Go to PDB code:  Tunnel analysis for: 1c5l calculated with MOLE 2.0 PDB id 1c5l Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.39 23.5 -1.59 -0.78 19.8 82 4 4 1 0 2 1 0  NA 409 H 2 1.15 1.15 24.3 -1.14 -0.66 15.8 69 1 4 1 0 2 0 1   3 1.15 1.40 28.7 -0.49 -0.21 7.7 72 2 3 2 2 4 0 0   4 1.14 1.15 36.7 -1.81 -0.40 23.1 76 4 5 2 0 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.