spacer
spacer

Ligand clusters for UniProt code P00968

Ligand clusters for P00968: Carbamoyl-phosphate synthase large chain OS=Escherichia coli (strain K12) GN=carB PE=1 SV=2

Top 6 (of 20) ligand clusters
Cluster 1.
5 ligand types
54 ligands
Cluster 2.
4 ligand types
29 ligands
Cluster 3.
4 ligand types
4 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
12 ligands
Cluster 6.
1 ligand type
10 ligands
Representative protein: 1bxrA  
 

Structures

PDB   Schematic diagram
1bxrA    
1ce8A    
1cs0A    
1jdbB    
1keeA    
 more ...

 

 Cluster 1 contains 5 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ADP × 9
Adenosine-5'-Diphosphate
PDB codes: 1a9x(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).


 
2. Ligand: PO4 × 9
Phosphate ion
PDB codes: 1a9x(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).


 
3. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 1bxr(A).

_Mn
 
4. Metal: _MN × 19
PDB codes: 1a9x(A), 1bxr(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A),

__K
 
5. Metal: __K × 16
PDB codes: 1a9x(A), 1bxr(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).

 

 Cluster 2 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ADP × 9
Adenosine-5'-Diphosphate
PDB codes: 1a9x(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).


 
2. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 1bxr(A).

_Mn
 
3. Metal: _MN × 12
PDB codes: 1a9x(A), 1bxr(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).

__K
 
4. Metal: __K × 7
PDB codes: 1a9x(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1kee(A), 1m6v(A).

 

 Cluster 3 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GLN × 1
PDB code: 1jdb(B).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 1jdb(B).


 
3. Ligand: IMP × 1
Inosinic acid
PDB code: 1ce8(A).


 
4. Ligand: __U × 1
PDB code: 1t36(A).

 

 Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GLN × 2
PDB codes: 1c3o(A), 1jdb(B).


 
2. Ligand: ORN × 1
L-Ornithine
PDB code: 1ce8(A).

 

 Cluster 5 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NET × 10
Tetraethylammonium ion
PDB codes: 1a9x(A), 1bxr(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).

_Cl
 
2. Metal: _CL × 2
PDB codes: 1c30(A), 1m6v(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ORN × 10
L-Ornithine
PDB codes: 1a9x(A), 1bxr(A), 1c30(A), 1c3o(A), 1ce8(A), 1cs0(A), 1jdb(B), 1kee(A), 1m6v(A), 1t36(A).

 

spacer

spacer