PDBsum entry 1bqh Go to PDB code:  Pore analysis for: 1bqh calculated with MOLE 2.0 PDB id 1bqh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.37 27.3 -1.65 -0.43 25.0 88 4 2 4 3 2 0 0   2 1.69 1.89 37.2 -1.51 -0.51 19.1 81 4 7 3 1 3 0 0   3 1.43 1.76 91.4 -0.91 -0.31 9.4 83 4 6 7 4 4 2 0  NAG 130 H 4 1.37 1.79 130.6 -0.89 -0.24 15.9 85 5 8 8 8 4 1 0  NAG 130 H 5 2.16 3.63 25.7 -1.59 -0.30 26.9 82 4 4 1 3 1 0 0   6 2.39 2.65 29.5 -1.37 -0.40 15.5 80 2 4 2 1 2 2 0   7 1.99 2.14 35.2 -2.28 -0.86 21.4 88 2 6 7 1 0 1 0   8 1.98 2.13 36.9 -1.75 -0.63 19.9 83 3 6 4 1 2 0 0   9 1.56 4.18 49.4 -2.17 -0.61 23.4 82 5 7 5 4 2 0 0   10 1.40 3.99 50.8 -1.72 -0.30 22.1 79 6 6 4 3 5 0 0   11 1.38 1.38 68.6 -1.38 -0.50 16.9 84 5 5 6 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.