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PDBsum entry 1bpv
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* Residue conservation analysis
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Enzyme class:
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E.C.2.7.11.1
- non-specific serine/threonine protein kinase.
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Reaction:
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1.
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L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
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2.
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L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
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L-seryl-[protein]
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+
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ATP
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=
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O-phospho-L-seryl-[protein]
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+
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ADP
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+
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H(+)
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L-threonyl-[protein]
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+
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ATP
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=
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O-phospho-L-threonyl-[protein]
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+
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ADP
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+
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H(+)
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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DOI no:
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Structure
6:1291-1302
(1998)
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PubMed id:
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The three-dimensional structure of a type I module from titin: a prototype of intracellular fibronectin type III domains.
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C.M.Goll,
A.Pastore,
M.Nilges.
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ABSTRACT
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BACKGROUND: Titin is a huge protein ( approximately 3 MDa) that is present in
the contractile unit (sarcomere) of striated muscle and has a key role in muscle
assembly and elasticity. Titin is mainly composed of two types of module (type I
and II). Type I modules are found exclusively in the region of titin localised
in the A band, where they are arranged in a super-repeat pattern that correlates
with the ultrastructure of the thick filament. No structure of a titin type I
module has been reported so far. RESULTS: We have determined the structure of a
representative type I module, A71, using nuclear magnetic resonance (NMR)
spectroscopy. The structure has the predicted fibronectin type III fold.
Titin-specific conserved residues are either located at the putative
module-module interfaces or along one side of the protein surface. Several
proline residues that contribute to two stretches in a polyproline II helix
conformation are solvent-exposed and line up as a continuous ribbon extending
over more than two-thirds of the module surface. Homology models of the type I
module N-terminal to A71 (A70) and the double module A70-A71 were used to
discuss possible intermodule interactions and their role in module-module
orientation. CONCLUSIONS: As residues at the module-module interfaces are highly
conserved, we speculate that similar interactions govern all of the interfaces
between type I modules in titin. This conservation would lead to a regular
multiple array of similar surface structures. Such an arrangement would allow
arrays of contiguous type I modules to expose multiple proline stretches in a
highly regular way and these may act as binding sites for other thick filament
proteins.
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Selected figure(s)
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Figure 6.
Figure 6. The solvent-exposed surface of A71. The surface
is displayed as white dots surrounding the CPK structure of A71.
Exposed proline sidechains (coloured in yellow) and the adjacent
hydrophobic patch of isoleucine residues (coloured in light
green) are shown in solid surface representation.
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The above figure is
reprinted
by permission from Cell Press:
Structure
(1998,
6,
1291-1302)
copyright 1998.
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Figure was
selected
by an automated process.
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Literature references that cite this PDB file's key reference
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PubMed id
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Reference
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A.V.Mikelsaar,
A.Sünter,
P.Toomik,
R.Mikelsaar,
I.Kalev,
A.Kõiveer,
A.Piirsoo,
K.Karpson,
and
E.Juronen
(2010).
Titin A-band-specific monoclonal antibody Tit1 5H1.1. Cellular Titin as a centriolar protein in non-muscle cells.
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Hybridoma (Larchmt),
29,
391-401.
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L.Tskhovrebova,
and
J.Trinick
(2010).
Roles of titin in the structure and elasticity of the sarcomere.
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J Biomed Biotechnol,
2010,
612482.
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A.Kontrogianni-Konstantopoulos,
M.A.Ackermann,
A.L.Bowman,
S.V.Yap,
and
R.J.Bloch
(2009).
Muscle giants: molecular scaffolds in sarcomerogenesis.
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Physiol Rev,
89,
1217-1267.
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I.Lappalainen,
M.G.Hurley,
and
J.Clarke
(2008).
Plasticity within the obligatory folding nucleus of an immunoglobulin-like domain.
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J Mol Biol,
375,
547-559.
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M.Marino,
D.I.Svergun,
L.Kreplak,
P.V.Konarev,
B.Maco,
D.Labeit,
and
O.Mayans
(2005).
Poly-Ig tandems from I-band titin share extended domain arrangements irrespective of the distinct features of their modular constituents.
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J Muscle Res Cell Motil,
26,
355-365.
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L.Tskhovrebova,
and
J.Trinick
(2004).
Properties of titin immunoglobulin and fibronectin-3 domains.
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J Biol Chem,
279,
46351-46354.
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M.C.Leake,
D.Wilson,
M.Gautel,
and
R.M.Simmons
(2004).
The elasticity of single titin molecules using a two-bead optical tweezers assay.
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Biophys J,
87,
1112-1135.
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M.Cieplak,
T.X.Hoang,
and
M.O.Robbins
(2004).
Thermal effects in stretching of Go-like models of titin and secondary structures.
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Proteins,
56,
285-297.
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A.Kontrogianni-Konstantopoulos,
and
R.J.Bloch
(2003).
The hydrophilic domain of small ankyrin-1 interacts with the two N-terminal immunoglobulin domains of titin.
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J Biol Chem,
278,
3985-3991.
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L.Tskhovrebova,
and
J.Trinick
(2003).
Titin: properties and family relationships.
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Nat Rev Mol Cell Biol,
4,
679-689.
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T.Shen,
L.S.Canino,
and
J.A.McCammon
(2002).
Unfolding proteins under external forces: a solvable model under the self-consistent pair contact probability approximation.
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Phys Rev Lett,
89,
068103.
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J.G.Head,
A.Houmeida,
P.J.Knight,
A.R.Clarke,
J.Trinick,
and
R.L.Brady
(2001).
Stability and folding rates of domains spanning the large A-band super-repeat of titin.
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Biophys J,
81,
1570-1579.
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R.A.Atkinson,
C.Joseph,
F.Dal Piaz,
L.Birolo,
G.Stier,
P.Pucci,
and
A.Pastore
(2000).
Binding of alpha-actinin to titin: implications for Z-disk assembly.
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Biochemistry,
39,
5255-5264.
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C.C.Gregorio,
H.Granzier,
H.Sorimachi,
and
S.Labeit
(1999).
Muscle assembly: a titanic achievement?
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Curr Opin Cell Biol,
11,
18-25.
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
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