PDBsum entry 1bkc Go to PDB code:  Tunnel analysis for: 1bkc calculated with MOLE 2.0 PDB id 1bkc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.34 25.2 -1.11 -0.39 17.9 74 3 1 1 3 1 0 1   2 1.21 1.30 31.0 -1.32 -0.40 18.4 73 3 1 2 2 1 1 1   3 1.22 1.31 31.0 -0.74 -0.33 11.6 67 4 1 1 2 1 2 2   4 1.86 2.06 19.2 0.29 -0.09 10.6 80 1 1 0 6 1 0 0  INN 2 C 5 1.31 2.11 15.2 -1.33 -0.61 17.6 72 2 1 1 0 1 0 1   6 1.33 2.14 16.7 -1.07 -0.50 17.7 75 3 1 1 1 0 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.