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PDBsum entry 1bji

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Cleft analysis for: 1bji PDB id
1bji
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1749.52 0.95 79.69 1 12.96 1 8.73 3 10 6 18 5 3 5 0 DPC 479G[A] (28 atoms)
2 1849.92 0.00 66.04 3 8.69 5 10.72 1 5 10 9 6 6 4 6  
3 706.64 0.00 59.22 7 10.49 3 8.04 7 3 0 2 3 3 1 0 NAG 477A[A] (4 atoms)
4 577.97 0.00 62.25 5 10.25 4 9.02 2 3 0 6 0 1 2 0  
5 723.52 0.00 58.59 8 6.64 7 8.61 4 5 6 1 4 1 2 0  
6 402.05 0.00 57.79 9 5.28 9 8.31 6 2 1 1 0 2 2 0  
7 490.64 0.00 46.88 10 4.73 10 7.25 9 3 3 1 0 2 2 0 NAG 476A[A](1 atom)
8 490.64 0.00 59.33 6 10.54 2 7.40 8 2 1 4 2 1 3 0  
9 532.83 0.00 62.62 4 5.28 8 6.43 10 2 1 5 6 1 2 0  
10 436.64 0.00 68.39 2 7.32 6 8.36 5 3 1 3 5 2 3 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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