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PDBsum entry 1bgx

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1bgx calculated with MOLE 2.0 PDB id
1bgx
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.62 1.72 36.7 0.52 0.23 12.1 73 4 2 1 8 1 2 0  
2 1.37 1.37 48.3 0.32 0.30 15.8 69 4 3 0 7 7 1 0  
3 1.27 1.27 56.2 -1.97 -0.51 26.0 84 9 6 3 3 3 0 0  
4 1.09 1.42 65.0 -1.28 -0.45 17.6 79 5 4 3 6 2 2 0  
5 1.37 1.37 75.3 0.76 0.10 8.1 79 2 3 1 11 3 4 0  
6 2.08 2.80 84.4 -1.08 -0.43 17.3 85 7 6 3 5 3 3 0  
7 1.29 2.65 83.8 -1.68 -0.40 24.7 82 9 8 4 6 3 2 0  
8 1.23 1.28 93.9 0.16 0.06 13.4 81 7 5 4 14 2 2 0  
9 1.27 2.65 103.3 -1.94 -0.41 27.5 80 12 10 4 6 6 2 0  
10 1.28 1.68 113.7 -0.82 -0.01 17.1 73 11 8 4 14 15 1 0  
11 1.32 2.61 151.7 -0.80 -0.11 17.5 73 11 7 4 11 8 2 0  
12 1.19 1.72 196.2 -2.03 -0.37 27.1 79 19 14 5 6 7 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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